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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LIHC rs13087673 chr3:125440341 G/C 0 190 13.13 14.43 0.75 KM Plot
LIHC rs13105618 chr4:44678647 T/C 2.82E-6 192 3.37 13.55 16.07 KM Plot
LIHC rs13107893 chr4:44665804 C/T 2.82E-6 192 3.37 13.55 16.07 KM Plot
LIHC rs13139704 chr4:44723427 T/A 8.62E-6 191 3.03 13.55 16.07 KM Plot
LIHC rs13146432 chr4:44676161 G/A 2.82E-6 192 3.37 13.55 16.07 KM Plot
LIHC rs13146617 chr4:57014194 G/A 0.000337 182 11.63 14.27 20.05 KM Plot
LIHC rs13149052 chr4:44639311 C/T 6.05E-5 188 5.7 13.17 16.33 KM Plot
LIHC rs13150454 chr4:110756211 A/G 9.51E-5 179 13.78 13.58 3.43 KM Plot
LIHC rs13222878 chr7:64447497 C/A 4.0E-12 192 1.77 5.7 13.97 KM Plot
LIHC rs13229671 chr7:64416884 T/G 3.53E-7 192 2.9 5.22 13.97 KM Plot
LIHC rs13229816 chr7:64417052 C/T 2.42E-8 192 13.9 5.7 2.9 KM Plot
LIHC rs13230970 chr7:64444630 G/A 4.0E-12 192 1.77 5.7 13.97 KM Plot
LIHC rs1326399 chr13:46648607 C/T 0.000289 190 13.28 13.97 7.87 KM Plot
LIHC rs1326400 chr13:46648523 A/G 0.000289 190 13.28 13.97 7.87 KM Plot
LIHC rs13306519 chr1:66037929 C/G 0.00048 192 1.63 8.05 13.58 KM Plot